I probably don't know as mjuch as some. But I can say what I think.
The idea of grey card white balancing is to be done whilst on the dive.
You get to the depth you will be gtaking photos, you set the white balance as per your grey card, sand whatever. Then the camera knows what is white and sets the other colours accordingly. I have never tried doing it to a photo using a image of a grey card.
If you change depths by 5ft or so, reset the white balance.
In post priocessing, if you have a RAW file you can fine tune the white balance before converting, JPG won't allow this.
I'm not sure if I am right in how it seems you did it.
But In mhy mind. If you set the white balance, and then in JPG try to auto correct there should not be much difference.
iI'm a little lost mostly to what you are asking, or the problem.
Photos seem to have nice colours to me. So looks like something mjust have gone right !! 